Description : scaffold component *(Nop58) of snoRNP rRNA methylation complex & original description: none
Gene families : OG0004943 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004943_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G05060 | No alias | NOP56-like pre RNA processing ribonucleoprotein | 0.07 | OrthoFinder output from all 47 species | |
AT5G27120 | No alias | NOP56-like pre RNA processing ribonucleoprotein | 0.09 | OrthoFinder output from all 47 species | |
Adi_g081321 | No alias | scaffold component *(Nop58) of snoRNP rRNA methylation... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g13968 | No alias | scaffold component *(Nop58) of snoRNP rRNA methylation... | 0.06 | OrthoFinder output from all 47 species | |
Azfi_s0045.g029768 | No alias | scaffold component *(Nop58) of snoRNP rRNA methylation... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g02668 | No alias | scaffold component *(Nop58) of snoRNP rRNA methylation... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021350.31 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.03 | OrthoFinder output from all 47 species | |
Cre10.g441400 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g17149 | No alias | scaffold component *(Nop58) of snoRNP rRNA methylation... | 0.04 | OrthoFinder output from all 47 species | |
Dde_g01696 | No alias | scaffold component *(Nop58) of snoRNP rRNA methylation... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01021905001 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g22740.1 | LOC_Os03g22740 | snoRNP scaffold component Nop58 of snoRNP rRNA... | 0.04 | OrthoFinder output from all 47 species | |
Len_g21735 | No alias | scaffold component *(Nop58) of snoRNP rRNA methylation... | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g06618 | No alias | scaffold component *(Nop58) of snoRNP rRNA methylation... | 0.04 | OrthoFinder output from all 47 species | |
MA_513089g0010 | No alias | snoRNP scaffold component Nop58 of snoRNP rRNA... | 0.05 | OrthoFinder output from all 47 species | |
Mp2g00370.1 | No alias | snoRNP scaffold component Nop58 of snoRNP rRNA... | 0.05 | OrthoFinder output from all 47 species | |
Nbi_g12240 | No alias | scaffold component *(Nop58) of snoRNP rRNA methylation... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g44166 | No alias | scaffold component *(Nop58) of snoRNP rRNA methylation... | 0.04 | OrthoFinder output from all 47 species | |
Smo146841 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.05 | OrthoFinder output from all 47 species | |
Solyc09g083080.4.1 | Solyc09g083080 | snoRNP scaffold component Nop58 of snoRNP rRNA... | 0.07 | OrthoFinder output from all 47 species | |
Spa_g15033 | No alias | scaffold component *(Nop58) of snoRNP rRNA methylation... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g28216 | No alias | scaffold component *(Nop58) of snoRNP rRNA methylation... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e038207_P001 | Zm00001e038207 | snoRNP scaffold component Nop58 of snoRNP rRNA... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000075 | cell cycle checkpoint signaling | IEP | HCCA |
BP | GO:0000077 | DNA damage checkpoint signaling | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
MF | GO:0004177 | aminopeptidase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006414 | translational elongation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008235 | metalloexopeptidase activity | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010564 | regulation of cell cycle process | IEP | HCCA |
BP | GO:0010948 | negative regulation of cell cycle process | IEP | HCCA |
MF | GO:0030145 | manganese ion binding | IEP | HCCA |
CC | GO:0030896 | checkpoint clamp complex | IEP | HCCA |
BP | GO:0031570 | DNA integrity checkpoint signaling | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
BP | GO:0042770 | signal transduction in response to DNA damage | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0045786 | negative regulation of cell cycle | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0048523 | negative regulation of cellular process | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
MF | GO:0070006 | metalloaminopeptidase activity | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
BP | GO:1901987 | regulation of cell cycle phase transition | IEP | HCCA |
BP | GO:1901988 | negative regulation of cell cycle phase transition | IEP | HCCA |
No external refs found! |