Sam_g19491


Description : not classified & original description: none


Gene families : OG0007769 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007769_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19491
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00136p00085920 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g10910,... 0.06 OrthoFinder output from all 47 species
Ala_g25084 No alias RNA editing factor *(PDM2) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g17655 No alias RNA editing factor *(PDM2) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04186.t1 Aspi01Gene04186 RNA editing factor *(PDM2) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G067700.1 Ceric.11G067700 RNA editing factor *(PDM2) & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g16063 No alias RNA editing factor *(PDM2) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11807 No alias RNA editing factor *(PDM2) & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g37870.4 LOC_Os01g37870 Pentatricopeptide repeat-containing protein At1g10910,... 0.04 OrthoFinder output from all 47 species
Nbi_g08999 No alias RNA editing factor *(PDM2) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10589 No alias RNA editing factor *(PDM2) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0141.g022758 No alias RNA editing factor *(PDM2) & original description: CDS=659-2260 0.02 OrthoFinder output from all 47 species
Solyc11g040260.2.1 Solyc11g040260 Pentatricopeptide repeat-containing protein At1g10910,... 0.05 OrthoFinder output from all 47 species
Zm00001e020710_P002 Zm00001e020710 Pentatricopeptide repeat-containing protein At1g10910,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 216 264
IPR002885 Pentatricopeptide_repeat 276 333
No external refs found!