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  5. Sam_g19427

Sam_g19427


Description : microtubule assembly factor *(TCS1) & original description: none


Gene families : OG0000207 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19427

Target Alias Description ECC score Gene Family Method Actions
Ala_g12214 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50098.t1 Aspi01Gene50098 microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G092400.1 Ceric.13G092400 not classified & original description: pacid=50635125... 0.02 OrthoFinder output from all 47 species
Dde_g25539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13597 No alias recruiting factor *(VETH) of Exocyst complex & original... 0.02 OrthoFinder output from all 47 species
LOC_Os10g07480.1 LOC_Os10g07480 Filament-like plant protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g14154 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14167 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15032 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g36333 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009503 No alias not classified & original description: CDS=366-3284 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021772 No alias microtubule assembly factor *(TCS1) & original... 0.04 OrthoFinder output from all 47 species
Smo104884 No alias Filament-like plant protein 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Zm00001e001030_P003 Zm00001e001030 Filament-like plant protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR008587 FPP_plant 79 1003
No external refs found!