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  5. Sam_g19382

Sam_g19382


Description : regulatory protein *(CAD1) of Programmed Cell Death & original description: none


Gene families : OG0000861 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000861_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19382

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00180880 evm_27.TU.AmTr_v1... MACPF domain-containing protein At4g24290 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G28380 NSL1 MAC/Perforin domain-containing protein 0.03 OrthoFinder output from all 47 species
Als_g15849 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.03 OrthoFinder output from all 47 species
Azfi_s0476.g073024 No alias not classified & original description: CDS=210-2126 0.05 OrthoFinder output from all 47 species
Ceric.32G041500.1 CAD1, Ceric.32G041500 regulatory protein *(CAD1) of Programmed Cell Death &... 0.02 OrthoFinder output from all 47 species
Ceric.34G058000.1 Ceric.34G058000 not classified & original description: pacid=50624022... 0.02 OrthoFinder output from all 47 species
Dcu_g01857 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.03 OrthoFinder output from all 47 species
Dcu_g05635 CAD1 regulatory protein *(CAD1) of Programmed Cell Death &... 0.03 OrthoFinder output from all 47 species
Dcu_g09519 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.03 OrthoFinder output from all 47 species
Ehy_g09173 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.03 OrthoFinder output from all 47 species
GSVIVT01021099001 NSL1 MACPF domain-containing protein NSL1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01031622001 No alias MACPF domain-containing protein At4g24290 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os01g54510.1 CAD1, LOC_Os01g54510 MACPF domain-containing protein CAD1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g13186 CAD1 regulatory protein *(CAD1) of Programmed Cell Death &... 0.03 OrthoFinder output from all 47 species
MA_10436626g0030 No alias MACPF domain-containing protein At4g24290 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp5g18270.1 CAD1 MACPF domain-containing protein CAD1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g02346 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.02 OrthoFinder output from all 47 species
Ppi_g06926 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.03 OrthoFinder output from all 47 species
Ppi_g40629 CAD1 regulatory protein *(CAD1) of Programmed Cell Death &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001585 No alias not classified & original description: CDS=1-2223 0.03 OrthoFinder output from all 47 species
Smo234182 CAD1 MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo80474 CAD1 MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc02g071780.3.1 CAD1, Solyc02g071780 MACPF domain-containing protein CAD1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc02g077780.3.1 NSL1, Solyc02g077780 MACPF domain-containing protein NSL1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc04g048950.4.1 Solyc04g048950 MACPF domain-containing protein At4g24290 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc09g018030.4.1 CAD1, Solyc09g018030 MACPF domain-containing protein CAD1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc10g085710.3.1 CAD1, Solyc10g085710 MACPF domain-containing protein CAD1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Tin_g02759 CAD1 regulatory protein *(CAD1) of Programmed Cell Death &... 0.02 OrthoFinder output from all 47 species
Zm00001e019816_P001 CAD1, Zm00001e019816 MACPF domain-containing protein CAD1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR020864 MACPF 108 315
No external refs found!