Sam_g19328

Description : not classified & original description: none

Gene families : OG0000111 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g19328
Cluster	HCCA: Cluster_173

Target	Alias	Description	ECC score	Gene Family Method
ATMG00750	ORF119	GAG/POL/ENV polyprotein	0.02	OrthoFinder output from all 47 species
Adi_g002053	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g008046	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g017230	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g019611	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g020838	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g020860	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g046502	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g053894	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g054402	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g058890	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g069109	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g078525	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g086630	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g092470	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g099966	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g111245	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g125419	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g125947	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g00359	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g35114	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g25990	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g00199	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g57558	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene05849.t1	Aspi01Gene05849	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene07397.t1	Aspi01Gene07397	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene36439.t1	Aspi01Gene36439	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g06146	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g51825	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g55583	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g32237	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g20407	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g00221	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g56615	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g59010	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g00371	No alias	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Sam_g00734	No alias	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Sam_g00993	No alias	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Sam_g02382	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Sam_g09192	No alias	not classified & original description: none	0.12	OrthoFinder output from all 47 species
Sam_g09349	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g17781	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Sam_g18211	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g21246	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g24602	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g25600	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g27010	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g27690	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g28735	No alias	not classified & original description: none	0.12	OrthoFinder output from all 47 species
Sam_g37627	No alias	not classified & original description: none	0.11	OrthoFinder output from all 47 species
Sam_g40209	No alias	not classified & original description: none	0.14	OrthoFinder output from all 47 species
Sam_g40458	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Sam_g40570	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g44272	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g48410	No alias	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Sam_g49068	No alias	not classified & original description: none	0.14	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001584	Integrase_cat-core	120	217
IPR041588	Integrase_H2C2	47	105

External Links

No external refs found!

Sam_g19328

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation