Sam_g19305


Description : tRNA cytidine acetyltransferase adaptor protein & original description: none


Gene families : OG0005084 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005084_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19305
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AT5G12410 No alias THUMP domain-containing protein 0.03 OrthoFinder output from all 47 species
Ceric.09G019600.1 Ceric.09G019600 tRNA cytidine acetyltransferase adaptor protein &... 0.03 OrthoFinder output from all 47 species
Cre14.g629550 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os11g36060.1 LOC_Os11g36060 tRNA cytidine acetyltransferase adaptor protein 0.03 OrthoFinder output from all 47 species
MA_10425820g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g20730.1 No alias tRNA cytidine acetyltransferase adaptor protein 0.03 OrthoFinder output from all 47 species
Msp_g48493 No alias tRNA cytidine acetyltransferase adaptor protein &... 0.02 OrthoFinder output from all 47 species
Smo427525 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc11g065180.2.1 Solyc11g065180 tRNA cytidine acetyltransferase adaptor protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0007088 regulation of mitotic nuclear division IEP HCCA
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP HCCA
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0010965 regulation of mitotic sister chromatid separation IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
BP GO:0031577 spindle checkpoint signaling IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
BP GO:0033046 negative regulation of sister chromatid segregation IEP HCCA
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP HCCA
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045839 negative regulation of mitotic nuclear division IEP HCCA
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP HCCA
BP GO:0045930 negative regulation of mitotic cell cycle IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0051784 negative regulation of nuclear division IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
BP GO:0051985 negative regulation of chromosome segregation IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0071173 spindle assembly checkpoint signaling IEP HCCA
BP GO:0071174 mitotic spindle checkpoint signaling IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090730 Las1 complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140612 DNA damage sensor activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
BP GO:1905818 regulation of chromosome separation IEP HCCA
BP GO:1905819 negative regulation of chromosome separation IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR004114 THUMP_dom 170 281
No external refs found!