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  5. Sam_g19244

Sam_g19244


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000377_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19244

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00269020 BGAL7,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00136p00108810 BGAL1,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
AT2G32810 BGAL9 beta galactosidase 9 0.04 OrthoFinder output from all 47 species
AT4G26140 BGAL12 beta-galactosidase 12 0.02 OrthoFinder output from all 47 species
Aspi01Gene28377.t1 BGAL1, Aspi01Gene28377 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035970 BGAL8 EC_3.2 glycosylase & original description: CDS=528-3152 0.03 OrthoFinder output from all 47 species
GSVIVT01008835001 BGAL16 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
LOC_Os01g65460.1 BGAL10, LOC_Os01g65460 1,2-beta-galactosidase. beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
LOC_Os06g37560.1 BGAL1, LOC_Os06g37560 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
LOC_Os10g19960.1 BGAL7, LOC_Os10g19960 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
Smo269483 BGAL8 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
Smo404798 BGAL8 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
Spa_g55126 BGAL9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027012_P001 BGAL16, Zm00001e027012 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR031330 Gly_Hdrlase_35_cat 58 362
IPR000922 Lectin_gal-bd_dom 770 850
IPR041392 GHD 370 441
No external refs found!