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  5. Sam_g19238

Sam_g19238


Description : EC_1.1 oxidoreductase acting on CH-OH group of donor & original description: none


Gene families : OG0001365 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001365_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19238
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00073440 evm_27.TU.AmTr_v1... Carbohydrate metabolism.nucleotide sugar... 0.03 OrthoFinder output from all 47 species
AT5G39320 No alias UDP-glucose 6-dehydrogenase family protein 0.02 OrthoFinder output from all 47 species
Adi_g085855 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Adi_g110606 No alias UDP-D-glucose 6-dehydrogenase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0018.g014860 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Ceric.35G070200.1 Ceric.35G070200 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Dcu_g07552 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Dde_g02230 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Gb_30623 No alias UDP-D-glucose 6-dehydrogenase 0.04 OrthoFinder output from all 47 species
LOC_Os03g55070.1 LOC_Os03g55070 UDP-D-glucose 6-dehydrogenase 0.02 OrthoFinder output from all 47 species
LOC_Os12g25690.1 LOC_Os12g25690 UDP-D-glucose 6-dehydrogenase 0.02 OrthoFinder output from all 47 species
Len_g36622 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001250 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Solyc02g088690.4.1 Solyc02g088690 UDP-D-glucose 6-dehydrogenase 0.04 OrthoFinder output from all 47 species
Spa_g56759 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
MF GO:0051287 NAD binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR014027 UDP-Glc/GDP-Man_DH_C 328 451
IPR014026 UDP-Glc/GDP-Man_DH_dimer 210 304
IPR001732 UDP-Glc/GDP-Man_DH_N 3 186
No external refs found!