Sam_g19222


Description : E4 polyubiquitination factor *(UAP) & original description: none


Gene families : OG0001079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001079_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19222

Target Alias Description ECC score Gene Family Method Actions
Adi_g058985 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27592.t1 Aspi01Gene27592 E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59735.t1 Aspi01Gene59735 E4 polyubiquitination factor *(UAP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0054.g033608 No alias E4 polyubiquitination factor *(UAP) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0157.g053832 No alias E4 polyubiquitination factor *(UAP) & original... 0.04 OrthoFinder output from all 47 species
Dac_g12805 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01032424001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g07520.1 LOC_Os01g07520 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g19049 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g16866 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19334 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00949 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16375 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28018 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g053990.4.1 Solyc07g053990 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc10g008340.4.1 Solyc10g008340 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g49436 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10234 No alias E4 polyubiquiTination factor *(UAP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10516 No alias E4 polyubiquiTination factor *(UAP) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e025871_P001 Zm00001e025871 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e029034_P002 Zm00001e029034 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR010820 DUF1421 475 518
No external refs found!