Sam_g19157


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000725_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19157
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT1G49830 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G20100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g30685 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21207 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05285 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016594001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
LOC_Os12g08025.1 LOC_Os12g08025 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Len_g49434 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_504223g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Mp2g19970.1 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Ore_g39001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g107490.2.1 Solyc01g107490 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e027157_P001 Zm00001e027157 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e034854_P002 Zm00001e034854 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!