Sam_g19038


Description : component *(NNF1) of kinetochore KNL1-Mis12-Ndc80 network & original description: none


Gene families : OG0007866 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007866_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19038

Target Alias Description ECC score Gene Family Method Actions
Dcu_g12636 No alias component *(NNF1) of kinetochore KNL1-Mis12-Ndc80... 0.04 OrthoFinder output from all 47 species
Lfl_g19700 No alias component *(NNF1) of kinetochore KNL1-Mis12-Ndc80... 0.04 OrthoFinder output from all 47 species
Pir_g48814 EMB3006 component *(NNF1) of kinetochore KNL1-Mis12-Ndc80... 0.02 OrthoFinder output from all 47 species
Solyc12g096170.2.1 EMB3006, Solyc12g096170 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!