Sam_g18605


Description : not classified & original description: none


Gene families : OG0000728 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000728_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18605

Target Alias Description ECC score Gene Family Method Actions
Adi_g021965 AHK1, HK1, ATHK1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50107 ATCRE1, WOL,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28669 ATCRE1, WOL,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007882 ATCRE1, WOL,... not classified & original description: CDS=1035-4202 0.03 OrthoFinder output from all 47 species
Azfi_s0193.g057151 ATCRE1, WOL,... not classified & original description: CDS=363-3515 0.03 OrthoFinder output from all 47 species
Cba_g19061 ATCRE1, WOL,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38373 ATCRE1, WOL,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001128.36 AHK1, HK1, ATHK1 Probable histidine kinase 5 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.84 ETR, ETR1, EIN1, AtETR1 Probable histidine kinase 4 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Ehy_g31330 ATCRE1, WOL,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26635 ATCRE1, WOL,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05002 ATCRE1, WOL,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13841 ATCRE1, WOL,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0120.g021382 No alias not classified & original description: CDS=1446-2996 0.03 OrthoFinder output from all 47 species
Sam_g11633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo109384 ETR, ETR1, EIN1, AtETR1 Ethylene receptor 2 OS=Pelargonium hortorum 0.06 OrthoFinder output from all 47 species
Smo112002 ATCRE1, WOL,... Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.03 OrthoFinder output from all 47 species
Tin_g05663 ATCRE1, WOL,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06697 ATCRE1, WOL,... not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 4 98
No external refs found!