Cpa|evm.model.tig00020961.8


Description : DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0005822 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005822_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020961.8
Cluster HCCA: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00161460 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.02 Archaeplastida
Gb_33379 No alias DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.02 Archaeplastida
MA_10427047g0010 No alias DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.01 Archaeplastida
MA_12327g0010 No alias DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.01 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006415 translational termination IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001650 Helicase_C 293 385
IPR011545 DEAD/DEAH_box_helicase_dom 97 199
IPR000352 Pep_chain_release_fac_I 816 907
IPR005139 PCRF 638 708
No external refs found!