Sam_g18424


Description : not classified & original description: none


Gene families : OG0002179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002179_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18424

Target Alias Description ECC score Gene Family Method Actions
Aob_g06015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g54150.1 LOC_Os03g54150 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g07333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435907g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g03350.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g06579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!