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  5. Sam_g18380

Sam_g18380


Description : substrate adaptor *(HWS) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0002287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002287_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18380

Target Alias Description ECC score Gene Family Method Actions
Dcu_g07624 UFO substrate(LEAFY) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Mp8g08370.1 HS, HWS F-box/kelch-repeat protein At5g15710 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g26476 No alias substrate adaptor *(HWS) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 40 77
No external refs found!