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  5. Sam_g18215

Sam_g18215


Description : not classified & original description: none


Gene families : OG0010257 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010257_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18215
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Adi_g126956 No alias voltage-gated anion channel *(VDAC) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17447 No alias voltage-gated anion channel *(VDAC) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g15173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37707 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g39804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g47949 No alias voltage-gated anion channel *(VDAC) & original description: none 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR027246 Porin_Euk/Tom40 2 276
No external refs found!