Sam_g18188


Description : not classified & original description: none


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18188

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00057500 ATMYB4, MYB4,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.02 OrthoFinder output from all 47 species
AT3G02940 AtMYB107, MYB107 myb domain protein 107 0.02 OrthoFinder output from all 47 species
AT3G12720 ATY53, ATMYB67, MYB67 myb domain protein 67 0.02 OrthoFinder output from all 47 species
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.02 OrthoFinder output from all 47 species
AT5G26660 MYB86, ATMYB86 myb domain protein 86 0.02 OrthoFinder output from all 47 species
AT5G52260 MYB19, AtMYB19 myb domain protein 19 0.03 OrthoFinder output from all 47 species
Aspi01Gene35100.t1 MYB103,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35523.t1 MYB86, ATMYB86,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g009830 ATMYB46, MYB46 not classified & original description: CDS=116-1069 0.03 OrthoFinder output from all 47 species
Cba_g22039 AtMYB17, MYB17 MYB class-R2R3 subgroup-2 transcription factor &... 0.03 OrthoFinder output from all 47 species
Cba_g55856 AtMYB20, MYB20 MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G075100.1 AtMYB20, MYB20,... MYB class-R2R3 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.32G055600.1 AtMYB20, MYB20,... not classified & original description: pacid=50598352... 0.06 OrthoFinder output from all 47 species
Dac_g09559 MYB106, NOK, AtMYB106 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g50039 AtMYB50, MYB50 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17360 AtMYB17, MYB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000449001 ATMYB15, ATY19, MYB15 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01003662001 ATMYB102, ATM4, MYB102 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01004851001 AtMYB93, MYB93 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01009280001 MYB84, RAX3, ATMYB84 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01013126001 AtMYB107, MYB107 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01017716001 ATMYB61, MYB61 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01018577001 AtMYB42, MYB42 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01025034001 ATMYB59-1,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01025452001 ATMYB5, MYB5 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01032088001 AtMYB83, MYB83 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01035177001 AtMYB93, MYB93 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Gb_29789 MYB84, RAX3, ATMYB84 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Gb_32143 ATMYB4, MYB4 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Gb_36145 ATMIXTA, MYB16, ATMYB16 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Gb_39852 AtMYB74, MYB74 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g03720.1 BW62B, BW62C,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g52410.1 ATMYB38, MYB38,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g41510.1 ATMYB15, ATY19,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g27090.1 MYB9, AtMYB9,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g43680.1 ATMYB15, ATY19,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g48010.1 MYB84, RAX3,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os09g23620.1 AtMYB20, MYB20,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os09g26170.1 MYB36, AtMYB36,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Len_g29723 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.02 OrthoFinder output from all 47 species
MA_134436g0010 ATMYB5, MYB5 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_139238g0010 ATMYB61, MYB61 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_139448g0010 AtMYB79, MYB79 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_179894g0010 ATMYB12, PFG1, MYB12 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_936250g0010 AtMYB107, MYB107 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Nbi_g34033 AtMYB17, MYB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26576 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11256 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-10/24 transcription factor &... 0.03 OrthoFinder output from all 47 species
Solyc02g082040.3.1 ATY53, ATMYB67,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc02g089190.2.1 MYB121,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc03g005570.3.1 ATMYB14, MYB14,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc06g073640.4.1 ATMYB65, MYB65,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc08g076710.3.1 MYB9, AtMYB9,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc08g081500.3.1 MYB103,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc09g090790.3.1 MYB305, ATMYB71,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc12g099140.2.1 BOS1, AtMYB108,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Spa_g15278 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.03 OrthoFinder output from all 47 species
Spa_g37891 AtMYB50, MYB50 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51676 MYB86, ATMYB86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15617 MYB60, AtMYB60 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23787 ATMYB61, MYB61 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008489_P001 MYB36, AtMYB36,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e015235_P001 MYB19, AtMYB19,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e019941_P001 MYB37, RAX1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e025724_P001 BW62B, BW62C,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e041239_P001 ATMYB15, ATY19,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 111
IPR001005 SANT/Myb 14 61
No external refs found!