Sam_g18175


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000725_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00092220 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AT1G27660 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G31050 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G61660 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G20640 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G05170 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g058096 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09878 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g33477 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G003100.1 Ceric.32G003100 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.33G028900.1 Ceric.33G028900 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.33G029000.1 Ceric.33G029000 not classified & original description: pacid=50607112... 0.02 OrthoFinder output from all 47 species
Dcu_g01048 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09942 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10106 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005301001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
GSVIVT01009761001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01010280001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01018886001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Gb_33415 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Gb_40387 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os01g13000.1 LOC_Os01g13000 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
LOC_Os02g17680.1 LOC_Os02g17680 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os05g14010.1 LOC_Os05g14010 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os07g28890.1 LOC_Os07g28890 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_504223g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Mp2g19970.1 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Nbi_g17943 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37653 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g084880.3.1 Solyc02g084880 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc04g080710.4.1 Solyc04g080710 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc06g066580.4.1 Solyc06g066580 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc07g020960.3.1 Solyc07g020960 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Tin_g41831 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44400 No alias bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e005748_P002 Zm00001e005748 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e010350_P001 Zm00001e010350 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e031298_P001 Zm00001e031298 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
Zm00001e041137_P002 Zm00001e041137 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!