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  5. Sam_g18094

Sam_g18094


Description : not classified & original description: none


Gene families : OG0006383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006383_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18094

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g06230.1 PDE318, LOC_Os08g06230 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10431481g0020 PDE318 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g04840.1 PDE318 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0165.g024097 PDE318 not classified & original description: CDS=79-1539 0.02 OrthoFinder output from all 47 species
Solyc09g090460.3.1 PDE318, Solyc09g090460 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e040209_P002 PDE318, Zm00001e040209 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006353 DNA-templated transcription termination IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0032039 integrator complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR030389 G_FEOB_dom 298 355
IPR010674 NOG1_Rossman_fold_dom 363 420
IPR041623 NOG1_N 135 292
No external refs found!