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  5. Sam_g18051

Sam_g18051


Description : cellulose synthase CSC-interactive protein *(CSI) & original description: none


Gene families : OG0001114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18051

Target Alias Description ECC score Gene Family Method Actions
AT1G44120 No alias Armadillo/beta-catenin-like repeat ; C2... 0.05 OrthoFinder output from all 47 species
AT1G77460 No alias Armadillo/beta-catenin-like repeat ; C2... 0.03 OrthoFinder output from all 47 species
Adi_g087253 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Aev_g18895 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Aev_g39131 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Ala_g02729 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Ala_g22294 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Als_g23027 CSI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23029 CSI1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g29332 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g52429 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Als_g63688 CSI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24612 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Aop_g13572 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Aop_g27465 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.07 OrthoFinder output from all 47 species
Aop_g70913 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Cba_g14852 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Ceric.13G090700.1 CSI1, Ceric.13G090700 cellulose synthase CSC-interactive protein *(CSI) &... 0.09 OrthoFinder output from all 47 species
Ceric.34G038500.1 CSI1, Ceric.34G038500 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Ceric.34G069600.1 CSI1, Ceric.34G069600 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
Dac_g10736 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Dcu_g14963 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Dde_g08416 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
Ehy_g07970 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Ehy_g26551 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01022187001 CSI1 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
LOC_Os03g19462.1 CSI1, LOC_Os03g19462 Protein CELLULOSE SYNTHASE INTERACTIVE 1 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
LOC_Os06g11990.1 CSI1, LOC_Os06g11990 CSI-type cellulose synthase CSC-interactive protein 0.1 OrthoFinder output from all 47 species
Len_g09031 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Len_g11450 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Lfl_g18951 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.08 OrthoFinder output from all 47 species
Lfl_g27979 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
MA_10434233g0010 No alias CSI-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species
MA_10435637g0030 CSI1 Protein CELLULOSE SYNTHASE INTERACTIVE 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10435637g0040 CSI1 Protein CELLULOSE SYNTHASE INTERACTIVE 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_6106155g0010 CSI1 Protein CELLULOSE SYNTHASE INTERACTIVE 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp5g20900.1 CSI1 CSI-type cellulose synthase CSC-interactive protein 0.01 OrthoFinder output from all 47 species
Msp_g43695 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
Nbi_g16604 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Nbi_g18059 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.08 OrthoFinder output from all 47 species
Ore_g41278 CSI1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12256 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Pir_g13638 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Pir_g27649 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Ppi_g02426 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000730 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0120.g021360 No alias cellulose synthase CSC-interactive protein *(CSI) &... 0.07 OrthoFinder output from all 47 species
Smo78846 CSI1 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.04 OrthoFinder output from all 47 species
Solyc04g054480.3.1 CSI1, Solyc04g054480 CSI-type cellulose synthase CSC-interactive protein 0.05 OrthoFinder output from all 47 species
Spa_g10503 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.06 OrthoFinder output from all 47 species
Spa_g26858 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.06 OrthoFinder output from all 47 species
Tin_g04197 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Zm00001e030842_P001 CSI1, Zm00001e030842 Protein CELLULOSE SYNTHASE INTERACTIVE 1 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Zm00001e036124_P001 CSI1, Zm00001e036124 CSI-type cellulose synthase CSC-interactive protein 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 510 544
IPR000008 C2_dom 2014 2110
No external refs found!