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  5. Sam_g18011

Sam_g18011


Description : ferric cation-chelator transporter *(YSL) & original description: none


Gene families : OG0000334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18011

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01012035001 YSL7 Nutrient uptake.iron uptake.chelation-based strategy... 0.02 OrthoFinder output from all 47 species
Nbi_g01196 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g15427 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g55416 YSL7 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0124.g021611 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Sam_g03737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16876 No alias iron chelator transporter *(YSL) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41382 ATYSL1, YSL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 20 415
No external refs found!