Sam_g17907

Description : EC_5.2 cis-trans-isomerase & original description: none

Gene families : OG0004785 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004785_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g17907

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00058p00167600	ATCYP38, CYP38,...	Protein modification.protein folding and quality...	0.02	OrthoFinder output from all 47 species
AT3G01480	ATCYP38, CYP38	cyclophilin 38	0.04	OrthoFinder output from all 47 species
Aob_g06667	ATCYP38, CYP38	EC_5.2 cis-trans-isomerase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g23782	ATCYP38, CYP38	EC_5.2 cis-trans-isomerase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.32G007000.1	ATCYP38, CYP38,...	EC_5.2 cis-trans-isomerase & original description:...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001371.20	ATCYP38, CYP38	Protein modification.protein folding and quality...	0.02	OrthoFinder output from all 47 species
Cre03.g189800	ATCYP38, CYP38	Protein modification.protein folding and quality...	0.02	OrthoFinder output from all 47 species
Dac_g03629	ATCYP38, CYP38	peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) &...	0.03	OrthoFinder output from all 47 species
Ehy_g15113	ATCYP38, CYP38	EC_5.2 cis-trans-isomerase & original description: none	0.04	OrthoFinder output from all 47 species
Gb_08385	ATCYP38, CYP38	CYP38 protein involved in PS-II assembly. protein...	0.02	OrthoFinder output from all 47 species
LOC_Os08g29370.1	ATCYP38, CYP38,...	CYP38 protein involved in PS-II assembly. protein...	0.02	OrthoFinder output from all 47 species
Len_g22723	ATCYP38, CYP38	EC_5.2 cis-trans-isomerase & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g08478	ATCYP38, CYP38	EC_5.2 cis-trans-isomerase & original description: none	0.05	OrthoFinder output from all 47 species
MA_7732g0010	ATCYP38, CYP38	CYP38 protein involved in PS-II assembly. protein...	0.04	OrthoFinder output from all 47 species
Mp1g20230.1	ATCYP38, CYP38	CYP38 protein involved in PS-II assembly. protein...	0.03	OrthoFinder output from all 47 species
Msp_g08008	ATCYP38, CYP38	EC_5.2 cis-trans-isomerase & original description: none	0.07	OrthoFinder output from all 47 species
Ore_g06384	ATCYP38, CYP38	EC_5.2 cis-trans-isomerase & original description: none	0.05	OrthoFinder output from all 47 species
Pnu_g12167	ATCYP38, CYP38	EC_5.2 cis-trans-isomerase & original description: none	0.03	OrthoFinder output from all 47 species
Smo413851	ATCYP38, CYP38	Protein modification.protein folding and quality...	0.04	OrthoFinder output from all 47 species
Spa_g06559	ATCYP38, CYP38	EC_5.2 cis-trans-isomerase & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g22631	ATCYP38, CYP38	EC_5.2 cis-trans-isomerase & original description: none	0.06	OrthoFinder output from all 47 species
Tin_g00981	ATCYP38, CYP38	EC_5.2 cis-trans-isomerase & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016859	cis-trans isomerase activity	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018208	peptidyl-proline modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002130	Cyclophilin-type_PPIase_dom	276	432

External Links

No external refs found!

Sam_g17907

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation