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  5. Sam_g17884

Sam_g17884


Description : Qa-type SYP3-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0002044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17884

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene27499.t1 SYP32, ATSYP32,... Qa-type SYP3-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Azfi_s0402.g068317 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Cba_g04464 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Ehy_g15873 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
GSVIVT01035729001 SYP32, ATSYP32 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 287 339
IPR021538 Syntaxin-5_N 2 23
No external refs found!