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  5. Sam_g17767

Sam_g17767


Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0001452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17767

Target Alias Description ECC score Gene Family Method Actions
Gb_41255 ADC2, SPE2, ATADC2 arginine decarboxylase 0.03 OrthoFinder output from all 47 species
MA_442814g0010 ADC2, SPE2, ATADC2 arginine decarboxylase 0.02 OrthoFinder output from all 47 species
Pir_g16407 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e036595_P001 ADC2, SPE2,... arginine decarboxylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
InterPro domains Description Start Stop
IPR041128 Arg_decarbox_C 663 706
IPR040634 Arg_decarb_HB 442 502
IPR022644 De-COase2_N 126 392
No external refs found!