Sam_g17720


Description : plastidial protease *(EGY) & original description: none


Gene families : OG0001488 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001488_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17720

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00233910 ATEGY2, EGY2,... Protein modification.peptide maturation.plastid.EGY protease 0.02 OrthoFinder output from all 47 species
Adi_g011408 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g048112 ATEGY3, EGY3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02423 EGY1 plastidial protease *(EGY) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g07576 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08181 EGY1 plastidial protease *(EGY) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10514 EGY1 plastidial protease *(EGY) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05023 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07312 EGY1 plastidial protease *(EGY) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06508 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10745 ATEGY3, EGY3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17561 EGY1 plastidial protease *(EGY) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g11611 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.11 OrthoFinder output from all 47 species
Cba_g15554 EGY1 plastidial protease *(EGY) & original description: none 0.06 OrthoFinder output from all 47 species
Cre03.g206929 EGY1 Protein modification.peptide maturation.plastid.EGY protease 0.02 OrthoFinder output from all 47 species
Dac_g01699 EGY1 plastidial protease *(EGY) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g24885 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g01688 EGY1 plastidial protease *(EGY) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10754 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17576 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01032853001 ATEGY2, EGY2 Protein modification.peptide maturation.plastid.EGY protease 0.04 OrthoFinder output from all 47 species
Gb_19505 ATEGY2, EGY2 Probable zinc metalloprotease EGY2, chloroplastic... 0.02 OrthoFinder output from all 47 species
Gb_19506 ATEGY2, EGY2 Probable zinc metalloprotease EGY2, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os01g04900.1 ATEGY2, EGY2,... plastidial protease (EGY) 0.02 OrthoFinder output from all 47 species
Len_g14484 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.03 OrthoFinder output from all 47 species
MA_111858g0010 ATEGY3, EGY3 Probable zinc metallopeptidase EGY3, chloroplastic... 0.02 OrthoFinder output from all 47 species
MA_134418g0010 ATEGY2, EGY2 Probable zinc metalloprotease EGY2, chloroplastic... 0.04 OrthoFinder output from all 47 species
Mp2g04020.1 ATEGY2, EGY2 plastidial protease (EGY) 0.02 OrthoFinder output from all 47 species
Nbi_g14313 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26235 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09642 EGY1 plastidial protease *(EGY) & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g08207 ATEGY3, EGY3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10268 EGY1 plastidial protease *(EGY) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10559 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g13868 ATEGY3, EGY3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31046 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010077 ATEGY2, EGY2 plastidial protease *(EGY) & original description: CDS=1-1365 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021268 EGY1 plastidial protease *(EGY) & original description: CDS=100-1773 0.05 OrthoFinder output from all 47 species
Sam_g01007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g019200.4.1 ATEGY2, EGY2,... plastidial protease (EGY) 0.05 OrthoFinder output from all 47 species
Solyc10g081470.2.1 EGY1, Solyc10g081470 plastidial protease (EGY) 0.03 OrthoFinder output from all 47 species
Spa_g00449 EGY1 plastidial protease *(EGY) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09891 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g00823 ATEGY2, EGY2 plastidial protease *(EGY) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02788 EGY1 plastidial protease *(EGY) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!