Sam_g17718

Description : component *(CAF) of CRS2-CAF plastidial RNA splicing factor complexes & original description: none

Gene families : OG0001061 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001061_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g17718

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00056p00043140	ATCAF1, CAF1,...	RNA processing.organelle machineries.RNA...	0.02	OrthoFinder output from all 47 species
Ceric.11G050500.1	CAF2, ATCAF2,...	component *(CAF) of CRS2-CAF plastidial RNA splicing...	0.03	OrthoFinder output from all 47 species
Tin_g12704	ATCAF1, CAF1	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001890	RNA-binding_CRM	408	491
IPR001890	RNA-binding_CRM	526	609

External Links

No external refs found!