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  5. Sam_g17680

Sam_g17680


Description : not classified & original description: none


Gene families : OG0002387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17680

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00252p00015420 SVL4,... Glycerophosphodiester phosphodiesterase GDPDL6... 0.02 OrthoFinder output from all 47 species
Adi_g019689 SVL3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40029 GPDL2, SHV3, MRH5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08832 SVL4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G056600.1 SVL5, Ceric.08G056600 not classified & original description: pacid=50637619... 0.04 OrthoFinder output from all 47 species
Ceric.17G055800.1 SVL5, Ceric.17G055800 not classified & original description: pacid=50617674... 0.03 OrthoFinder output from all 47 species
Dac_g18847 SVL4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003731001 SVL5 Glycerophosphodiester phosphodiesterase GDPDL6... 0.02 OrthoFinder output from all 47 species
Gb_18319 SVL1 Glycerophosphodiester phosphodiesterase GDPDL4... 0.03 OrthoFinder output from all 47 species
LOC_Os04g39610.1 GPDL2, SHV3,... Glycerophosphodiester phosphodiesterase GDPDL4... 0.02 OrthoFinder output from all 47 species
LOC_Os08g39350.1 SVL1, LOC_Os08g39350 Glycerophosphodiester phosphodiesterase GDPDL4... 0.01 OrthoFinder output from all 47 species
Lfl_g02261 SVL4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26126 SVL5 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g26745 SVL5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05893 SVL5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g014530.4.1 SVL4, Solyc02g014530 Glycerophosphodiester phosphodiesterase GDPDL6... 0.02 OrthoFinder output from all 47 species
Zm00001e035558_P002 SVL1, Zm00001e035558 Glycerophosphodiester phosphodiesterase GDPDL4... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0008081 phosphoric diester hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR030395 GP_PDE_dom 373 665
No external refs found!