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  5. Sam_g17546

Sam_g17546


Description : not classified & original description: none


Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17546

Target Alias Description ECC score Gene Family Method Actions
AT1G17200 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
Aop_g06538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20279 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18890.t1 Aspi01Gene18890 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g030020 No alias not classified & original description: CDS=85-666 0.04 OrthoFinder output from all 47 species
Ceric.02G018700.1 Ceric.02G018700 not classified & original description: pacid=50584078... 0.03 OrthoFinder output from all 47 species
Dac_g09088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13286 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10431555g0010 No alias CASP-like protein 2A3 OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
Mp5g15430.1 No alias CASP-like protein 2U1 OS=Marchantia polymorpha... 0.02 OrthoFinder output from all 47 species
Nbi_g05164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39866 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10053 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo418756 No alias CASP-like protein 2U8 OS=Selaginella moellendorffii 0.02 OrthoFinder output from all 47 species
Solyc07g006855.2.1 Solyc07g006855 CASP-like protein 2C1 OS=Populus trichocarpa... 0.03 OrthoFinder output from all 47 species
Spa_g06771 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 47 197
No external refs found!