Sam_g17500

Description : not classified & original description: none

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g17500
Cluster	HCCA: Cluster_149

Target	Alias	Description	ECC score	Gene Family Method
Adi_g000264	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Adi_g005782	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g007701	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g073265	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g04895	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g11720	ATMRP14, ABCC10, MRP14	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g42759	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g47598	ATMRP14, ABCC10, MRP14	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g17286	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene04340.t1	MRP6, ATMRP6,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene05224.t1	ATMRP12, MRP12,...	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene05228.t1	AtABCC2, ABCC2,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene26287.t1	EST3, MRP4,...	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene26415.t1	EST3, MRP4,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene29535.t1	MRP10, ATMRP10,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene33255.t1	EST3, MRP4,...	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene43479.t1	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene45964.t1	ATABCC5, MRP5,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene45971.t2	MRP6, ATMRP6,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene64349.t1	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene64352.t2	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g01336	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g06904	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g24925	MRP10, ATMRP10, ABCC14	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g44465	EST3, MRP4, ATMRP4, ABCC4	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g49210	ABCC12, MRP13, ATMRP13	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Gb_17216	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Gb_20972	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Gb_23689	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Gb_24588	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Msp_g14395	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g19144	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Msp_g39940	No alias	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Ppi_g12667	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g15560	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g17499	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	2	115

External Links

No external refs found!

Sam_g17500

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation