Sam_g17499

Description : not classified & original description: none

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g17499

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00218350	MRP10, ATMRP10,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AT3G13090	ATMRP8, MRP8, ABCC6	multidrug resistance-associated protein 8	0.02	OrthoFinder output from all 47 species
AT3G13100	ABCC7, ATMRP7, MRP7	multidrug resistance-associated protein 7	0.03	OrthoFinder output from all 47 species
Ala_g27220	ABCC12, MRP13, ATMRP13	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g28342	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g11934	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene04344.t1	MRP6, ATMRP6,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene64348.t1	ABCC1, ATABCC1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g07587	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.23G061900.1	ABCC1, ATABCC1,...	subfamily ABCC transporter & original description:...	0.02	OrthoFinder output from all 47 species
Dac_g08766	AtABCC2, ABCC2,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g15072	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g26836	MRP11, ABCC13, ATMRP11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01014628001	ABCC3, ATMRP3, MRP3	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01019475001	ATMRP14, ABCC10, MRP14	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Gb_35586	ATABCC5, MRP5,...	subfamily ABCC transporter	0.04	OrthoFinder output from all 47 species
MA_10431617g0010	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
MA_11781g0010	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
MA_11781g0020	MRP6, ATMRP6, ABCC8	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Mp5g13220.1	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter	0.04	OrthoFinder output from all 47 species
Mp5g13230.1	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter	0.04	OrthoFinder output from all 47 species
Msp_g14759	MRP9, ABCC9, ATMRP9	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017297	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: CDS=111-3830	0.02	OrthoFinder output from all 47 species
Sam_g17500	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo163776	ATABCC5, MRP5,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo417771	ATMRP12, MRP12, ABCC11	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	11	161

External Links

No external refs found!

Sam_g17499

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation