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  5. Sam_g17495

Sam_g17495


Description : not classified & original description: none


Gene families : OG0003935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003935_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17495

Target Alias Description ECC score Gene Family Method Actions
AT1G24460 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
AT4G31570 No alias CONTAINS InterPro DOMAIN/s: Prefoldin... 0.03 OrthoFinder output from all 47 species
Aev_g30321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22595 No alias vesicle trafficking tethering factor *(TNO1) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0154.g053538 No alias not classified & original description: CDS=266-7378 0.04 OrthoFinder output from all 47 species
GSVIVT01033178001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Lfl_g07858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38228 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g014200.3.1 Solyc05g014200 TNO1 vesicle trafficking tethering factor 0.04 OrthoFinder output from all 47 species
Solyc08g006420.3.1 Solyc08g006420 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!