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  5. Sam_g17492

Sam_g17492


Description : not classified & original description: none


Gene families : OG0002269 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17492

Target Alias Description ECC score Gene Family Method Actions
Ala_g08012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30409 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g12318 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene27737.t1 Aspi01Gene27737 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0129.g048883 No alias not classified & original description: CDS=392-1735 0.04 OrthoFinder output from all 47 species
Cba_g05855 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z088200.1 Ceric.1Z088200 not classified & original description: pacid=50573450... 0.03 OrthoFinder output from all 47 species
Dac_g01643 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os12g07190.1 LOC_Os12g07190 CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Len_g58110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g01913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002870_P003 Zm00001e002870 CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 115 159
IPR000644 CBS_dom 224 271
IPR000644 CBS_dom 284 326
IPR000644 CBS_dom 55 100
IPR000270 PB1_dom 407 481
No external refs found!