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  5. Sam_g17483

Sam_g17483


Description : not classified & original description: none


Gene families : OG0003078 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003078_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17483

Target Alias Description ECC score Gene Family Method Actions
AT4G13750 NOV Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase... 0.02 OrthoFinder output from all 47 species
Adi_g019416 NOV not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15575 NOV not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001416.10 NOV No description available 0.02 OrthoFinder output from all 47 species
Cre14.g608200 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre17.g697150 NOV No description available 0.02 OrthoFinder output from all 47 species
Dac_g06695 NOV not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12851 NOV not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02477 NOV not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017967 No alias not classified & original description: CDS=1-201 0.03 OrthoFinder output from all 47 species
Smo158880 NOV No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008569 minus-end-directed microtubule motor activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR024975 NOV_C 2528 2614
No external refs found!