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  5. Sam_g17474

Sam_g17474


Description : not classified & original description: none


Gene families : OG0003819 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003819_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17474

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00194330 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G50380 No alias Protein of unknown function (DUF1162) 0.05 OrthoFinder output from all 47 species
GSVIVT01005092001 No alias No description available 0.04 OrthoFinder output from all 47 species
MA_10437277g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc02g090130.4.1 Solyc02g090130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR009543 VPS13_VAB 2301 2545
No external refs found!