1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g17458

Sam_g17458


Description : not classified & original description: none


Gene families : OG0000018 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17458
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT3G22220 No alias hAT transposon superfamily 0.03 OrthoFinder output from all 47 species
Adi_g007309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g032629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g047472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g052694 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g125897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g29708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017686001 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g30229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g57196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g007470.2.1 Solyc08g007470 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 556 623
IPR007021 DUF659 185 336
No external refs found!