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  5. Sam_g17401

Sam_g17401


Description : transcriptional regulator *(PRI1) of transient metal homeostasis & original description: none


Gene families : OG0000710 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000710_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17401

Target Alias Description ECC score Gene Family Method Actions
Ala_g23463 ILR3, bHLH105 transcriptional regulator *(PRI1) of transient metal... 0.03 OrthoFinder output from all 47 species
Ehy_g06484 ILR3, bHLH105 transcriptional regulator *(PRI1) of transient metal... 0.03 OrthoFinder output from all 47 species
Pir_g30993 ILR3, bHLH105 transcriptional regulator *(PRI1) of transient metal... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010401 bHLH34 transcriptional regulator *(PRI1) of transient metal... 0.03 OrthoFinder output from all 47 species
Sam_g17220 No alias transcriptional regulator *(PRI1) of transient metal... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 81 130
No external refs found!