Sam_g17313


Description : not classified & original description: none


Gene families : OG0000313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000313_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17313
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT5G56120 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Aev_g02018 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g46613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene29314.t1 Aspi01Gene29314 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47707.t1 Aspi01Gene47707 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69470.t1 Aspi01Gene69470 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G050200.1 Ceric.34G050200 not classified & original description: pacid=50623593... 0.03 OrthoFinder output from all 47 species
Ceric.34G050300.1 Ceric.34G050300 not classified & original description: pacid=50623836... 0.03 OrthoFinder output from all 47 species
Ceric.34G050400.1 Ceric.34G050400 not classified & original description: pacid=50623439... 0.02 OrthoFinder output from all 47 species
Ceric.34G050600.1 Ceric.34G050600 not classified & original description: pacid=50623485... 0.02 OrthoFinder output from all 47 species
Ceric.34G051200.1 Ceric.34G051200 not classified & original description: pacid=50623802... 0.02 OrthoFinder output from all 47 species
LOC_Os08g38760.1 LOC_Os08g38760 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g17488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003362 No alias not classified & original description: CDS=1-648 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003378 No alias not classified & original description: CDS=1-624 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0215.g026035 No alias not classified & original description: CDS=1-822 0.03 OrthoFinder output from all 47 species
Sam_g02458 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g066540.1.1 Solyc07g066540 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e011930_P001 Zm00001e011930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!