Sam_g17288


Description : beta-type carbonic anhydrase & original description: none


Gene families : OG0000485 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000485_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17288
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00191040 CA18, CA2, BETA... Carbonic anhydrase, chloroplastic OS=Spinacia oleracea 0.08 OrthoFinder output from all 47 species
AT3G01500 CA1, ATBCA1,... carbonic anhydrase 1 0.12 OrthoFinder output from all 47 species
AT5G14740 CA18, CA2, BETA CA2 carbonic anhydrase 2 0.02 OrthoFinder output from all 47 species
Adi_g025117 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g047978 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g126897 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g09362 BCA4, CA4, ATBCA4 beta-type carbonic anhydrase & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g28258 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01076 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g00637 BCA4, CA4, ATBCA4 beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01426 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g04011 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g07083 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g29909 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05577 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g15189 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g42540 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene17650.t1 ATBCA3, BCA3,... beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26047.t1 Aspi01Gene26047 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene26048.t1 BCA4, CA4,... beta-type carbonic anhydrase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000614 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: CDS=345-1325 0.03 OrthoFinder output from all 47 species
Azfi_s0501.g073865 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: CDS=167-1258 0.08 OrthoFinder output from all 47 species
Cba_g09615 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13474 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G062800.1 CA18, CA2, BETA... beta-type carbonic anhydrase & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.08G018100.1 BCA4, CA4,... beta-type carbonic anhydrase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.08G018300.1 BCA4, CA4,... beta-type carbonic anhydrase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.08G018400.1 BCA4, CA4,... beta-type carbonic anhydrase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.17G071800.1 BCA4, CA4,... beta-type carbonic anhydrase & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000545.32 ATBCA5, BCA5 Beta carbonic anhydrase 2, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g00426 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15579 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g45686 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45841 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g07630 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00812 BCA4, CA4, ATBCA4 beta-type carbonic anhydrase & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01007745001 CA18, CA2, BETA CA2 Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum 0.02 OrthoFinder output from all 47 species
GSVIVT01032466001 CA1, ATBCA1,... Beta carbonic anhydrase 1, chloroplastic OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_07686 BCA4, CA4, ATBCA4 Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
LOC_Os01g45274.1 CA18, CA2, BETA... Carbonic anhydrase, chloroplastic OS=Hordeum vulgare... 0.04 OrthoFinder output from all 47 species
Len_g11971 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: none 0.07 OrthoFinder output from all 47 species
Len_g12434 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.09 OrthoFinder output from all 47 species
Len_g29570 ATBCA3, BCA3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g16023 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g31277 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
MA_25325g0010 CA1, ATBCA1,... Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum... 0.07 OrthoFinder output from all 47 species
MA_258624g0010 BCA4, CA4, ATBCA4 Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum... 0.06 OrthoFinder output from all 47 species
MA_9008009g0010 BCA4, CA4, ATBCA4 Carbonic anhydrase 1 OS=Flaveria linearis... 0.02 OrthoFinder output from all 47 species
Mp3g08980.1 CA18, CA2, BETA CA2 Carbonic anhydrase, chloroplastic OS=Pisum sativum... 0.02 OrthoFinder output from all 47 species
Mp6g07320.1 BCA4, CA4, ATBCA4 Carbonic anhydrase, chloroplastic OS=Pisum sativum... 0.1 OrthoFinder output from all 47 species
Mp8g15740.1 CA18, CA2, BETA CA2 Beta carbonic anhydrase 2, chloroplastic OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Msp_g05504 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g06762 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08917 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g09121 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g08176 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g17950 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00873 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.1 OrthoFinder output from all 47 species
Pir_g30147 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07364 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g12589 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c1_19190V3.1 CA18, CA2, BETA... carbonic anhydrase 2 0.01 OrthoFinder output from all 47 species
Ppi_g01820 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003081 CA18, CA2, BETA CA2 beta-type carbonic anhydrase & original description: CDS=1-771 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0180.g024810 BCA4, CA4, ATBCA4 beta-type carbonic anhydrase & original description: CDS=54-2105 0.02 OrthoFinder output from all 47 species
Sam_g10150 No alias beta-type carbonic anhydrase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g45908 No alias beta-type carbonic anhydrase & original description: none 0.04 OrthoFinder output from all 47 species
Smo102513 BCA4, CA4, ATBCA4 Carbonic anhydrase OS=Flaveria bidentis 0.04 OrthoFinder output from all 47 species
Smo95906 CA18, CA2, BETA CA2 Carbonic anhydrase, chloroplastic OS=Pisum sativum 0.05 OrthoFinder output from all 47 species
Solyc02g086820.3.1 CA1, ATBCA1,... Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Spa_g10480 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g10534 ATBCA3, BCA3 beta-type carbonic anhydrase & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g15516 CA1, ATBCA1,... beta-type carbonic anhydrase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e020359_P002 BCA4, CA4,... Carbonic anhydrase, chloroplastic OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
Zm00001e020360_P004 BCA4, CA4,... Carbonic anhydrase, chloroplastic OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001765 Carbonic_anhydrase 158 316
No external refs found!