Sam_g17285


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17285

Target Alias Description ECC score Gene Family Method Actions
Adi_g021084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g054668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02562 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05828 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15632 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21523 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33378 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06380 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19037 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30586 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30875 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32527 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55301 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55323 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58990 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03222 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07603 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11694 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010264 No alias not classified & original description: CDS=1-2337 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042638 No alias not classified & original description: CDS=1-2115 0.02 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0178.g056215 No alias not classified & original description: CDS=1-2514 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.02 OrthoFinder output from all 47 species
Azfi_s0254.g060427 No alias not classified & original description: CDS=1-2130 0.03 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.03 OrthoFinder output from all 47 species
Azfi_s0451.g070770 No alias not classified & original description: CDS=1-2109 0.03 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Azfi_s0541.g076347 No alias not classified & original description: CDS=106-2673 0.03 OrthoFinder output from all 47 species
Azfi_s1399.g102576 No alias not classified & original description: CDS=1-1533 0.03 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.02 OrthoFinder output from all 47 species
Cba_g05321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07618 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20837 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g66799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67218 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67893 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G025600.1 Ceric.10G025600 not classified & original description: pacid=50611862... 0.02 OrthoFinder output from all 47 species
Ceric.14G038700.1 Ceric.14G038700 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G039900.1 Ceric.19G039900 not classified & original description: pacid=50575946... 0.02 OrthoFinder output from all 47 species
Ceric.19G052100.1 Ceric.19G052100 not classified & original description: pacid=50575616... 0.03 OrthoFinder output from all 47 species
Ceric.1Z015700.1 VAC1, ECB2,... not classified & original description: pacid=50604577... 0.02 OrthoFinder output from all 47 species
Ceric.1Z025200.1 Ceric.1Z025200 not classified & original description: pacid=50576842... 0.02 OrthoFinder output from all 47 species
Ceric.23G007100.1 Ceric.23G007100 not classified & original description: pacid=50611480... 0.02 OrthoFinder output from all 47 species
Ceric.29G083700.1 Ceric.29G083700 not classified & original description: pacid=50625623... 0.03 OrthoFinder output from all 47 species
Ceric.34G015500.1 OTP84, Ceric.34G015500 not classified & original description: pacid=50623596... 0.02 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g08463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g13392 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g29239 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21308 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23648 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10365 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24004 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g29832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g29919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g30749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04282 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33060 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06113 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g07395 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g13702 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23878 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28104 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g19744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g28692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02291 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15003 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18166 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19560 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g45103 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63291 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13365 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18662 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18868 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18939 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004387 No alias not classified & original description: CDS=1-2973 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005759 No alias not classified & original description: CDS=1-3063 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007300 No alias not classified & original description: CDS=1-4008 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011395 No alias not classified & original description: CDS=1-2424 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016316 No alias not classified & original description: CDS=1-1953 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0124.g021576 No alias not classified & original description: CDS=1-3150 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022524 No alias not classified & original description: CDS=1-1371 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0190.g025256 No alias not classified & original description: CDS=1-3936 0.02 OrthoFinder output from all 47 species
Sam_g18632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g04449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05090 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18788 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25854 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g41036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 292 340
IPR002885 Pentatricopeptide_repeat 82 128
IPR002885 Pentatricopeptide_repeat 529 574
IPR002885 Pentatricopeptide_repeat 385 406
IPR002885 Pentatricopeptide_repeat 413 440
IPR002885 Pentatricopeptide_repeat 613 639
IPR002885 Pentatricopeptide_repeat 742 766
IPR002885 Pentatricopeptide_repeat 641 669
IPR002885 Pentatricopeptide_repeat 185 213
IPR002885 Pentatricopeptide_repeat 502 523
No external refs found!