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  5. Sam_g17186

Sam_g17186


Description : citrate synthase & original description: none


Gene families : OG0002699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002699_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17186
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT2G42790 CSY3 citrate synthase 3 0.02 OrthoFinder output from all 47 species
AT3G58740 CSY1 citrate synthase 1 0.03 OrthoFinder output from all 47 species
AT3G58750 CSY2 citrate synthase 2 0.03 OrthoFinder output from all 47 species
Aspi01Gene56998.t1 CSY2, Aspi01Gene56998 citrate synthase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19527 CSY2 citrate synthase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11906 CSY2 citrate synthase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000817001 CSY2 Lipid metabolism.lipid degradation.fatty acid... 0.03 OrthoFinder output from all 47 species
GSVIVT01037027001 PGP9 ABC transporter B family member 9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_06688 CSY3 citrate synthase 0.02 OrthoFinder output from all 47 species
Msp_g17735 CSY3 citrate synthase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08359 CSY2 citrate synthase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019786 Atg8-specific peptidase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901031 regulation of response to reactive oxygen species IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1902882 regulation of response to oxidative stress IEP HCCA
InterPro domains Description Start Stop
IPR002020 Citrate_synthase 98 466
No external refs found!