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  5. Sam_g17026

Sam_g17026


Description : not classified & original description: none


Gene families : OG0001358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g17026

Target Alias Description ECC score Gene Family Method Actions
Als_g13566 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01220 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g17610.1 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Nbi_g19042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
CC GO:0042575 DNA polymerase complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043625 delta DNA polymerase complex IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR008546 VAN3-bd-like_auxin_canal 97 383
IPR013666 PH_pln 417 520
No external refs found!