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  5. Sam_g16984

Sam_g16984


Description : not classified & original description: none


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16984

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00215810 evm_27.TU.AmTr_v1... AAA-ATPase At5g57480 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00024p00191310 evm_27.TU.AmTr_v1... AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00036p00176790 BCS1,... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT2G18193 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
Als_g05580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03243 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72897.t1 Aspi01Gene72897 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0059.g034525 No alias not classified & original description: CDS=1-2166 0.03 OrthoFinder output from all 47 species
Dcu_g05212 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g07739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 244 389
IPR025753 AAA_N_dom 29 121
No external refs found!