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  5. Sam_g16965

Sam_g16965


Description : GTPase *(Ran) & original description: none


Gene families : OG0000916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000916_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16965

Target Alias Description ECC score Gene Family Method Actions
Aop_g32625 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0147.g053043 RAN2 GTPase *(Ran) & original description: CDS=1-873 0.03 OrthoFinder output from all 47 species
Azfi_s0548.g076431 RAN2 GTPase *(Ran) & original description: CDS=1-873 0.03 OrthoFinder output from all 47 species
Cba_g45894 RAN2 GTPase *(Ran) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g31932 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g29387 RAN2 GTPase *(Ran) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00842 RAN2 GTPase *(Ran) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0018142 protein-DNA covalent cross-linking IEP HCCA
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 62 218
No external refs found!