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  5. Sam_g16880

Sam_g16880


Description : EC_5.3 intramolecular oxidoreductase & original description: none


Gene families : OG0003243 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003243_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16880
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271180 evm_27.TU.AmTr_v1... Carbohydrate metabolism.oxidative pentose phosphate... 0.07 OrthoFinder output from all 47 species
AT3G04790 No alias Ribose 5-phosphate isomerase, type A protein 0.04 OrthoFinder output from all 47 species
Als_g48216 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02930 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000551.5 No alias Carbohydrate metabolism.oxidative pentose phosphate... 0.02 OrthoFinder output from all 47 species
Cre03.g187450 No alias Carbohydrate metabolism.oxidative pentose phosphate... 0.03 OrthoFinder output from all 47 species
Dde_g14329 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g05556 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os07g08030.1 LOC_Os07g08030 phosphopentose isomerase. ribose 5-phosphate isomerase 0.02 OrthoFinder output from all 47 species
Len_g30006 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10435626g0040 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.02 OrthoFinder output from all 47 species
Mp8g18400.1 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.06 OrthoFinder output from all 47 species
Msp_g38416 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03389 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g10042 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10043 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c5_21490V3.1 Pp3c5_21490 Ribose 5-phosphate isomerase, type A protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016705 No alias EC_5.3 intramolecular oxidoreductase & original... 0.04 OrthoFinder output from all 47 species
Smo74055 No alias Carbohydrate metabolism.oxidative pentose phosphate... 0.03 OrthoFinder output from all 47 species
Solyc01g097460.3.1 Solyc01g097460 phosphopentose isomerase. ribose 5-phosphate isomerase 0.02 OrthoFinder output from all 47 species
Spa_g22712 No alias EC_5.3 intramolecular oxidoreductase & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e032919_P001 Zm00001e032919 phosphopentose isomerase. ribose 5-phosphate isomerase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEA Interproscan
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
InterPro domains Description Start Stop
IPR004788 Ribose5P_isomerase_type_A 119 293
No external refs found!