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  5. Sam_g16864

Sam_g16864


Description : not classified & original description: none


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16864
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT3G24220 NCED6, ATNCED6 nine-cis-epoxycarotenoid dioxygenase 6 0.02 OrthoFinder output from all 47 species
Aob_g17438 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Aspi01Gene35974.t1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Dac_g10533 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Gb_40717 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g59432 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
MA_450285g0010 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus... 0.02 OrthoFinder output from all 47 species
MA_90573g0010 CCD4, NCED4 carotenoid cleavage dioxygenase (CCD4) 0.03 OrthoFinder output from all 47 species
Ppi_g29309 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Ppi_g32214 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0149.g023278 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Sam_g30410 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!