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  5. Sam_g16764

Sam_g16764


Description : protease *(Deg) & original description: none


Gene families : OG0000580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16764
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00077590 DegP9,... Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Adi_g025739 DegP10 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17032 DegP9 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00361.t1 DegP9, Aspi01Gene00361 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010975 DegP10 protease *(Deg) & original description: CDS=1-1866 0.02 OrthoFinder output from all 47 species
Lfl_g10202 DegP10 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
MA_7242206g0010 DegP10 protease (Deg) 0.02 OrthoFinder output from all 47 species
Pnu_g10413 DegP9 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004208 DegP9 protease *(Deg) & original description: CDS=194-2086 0.03 OrthoFinder output from all 47 species
Sam_g09692 No alias protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15197 DegP9 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR041517 DEGP_PDZ 435 579
No external refs found!