Sam_g16580


Description : not classified & original description: none


Gene families : OG0000259 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16580

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00134970 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00010p00189870 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00010p00190300 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00025p00180200 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00055p00070380 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00092p00040150 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G19090 No alias Protein of unknown function (DUF630 and DUF632) 0.03 OrthoFinder output from all 47 species
AT3G51290 No alias Protein of unknown function (DUF630) ;Protein of unknown... 0.03 OrthoFinder output from all 47 species
AT4G30130 No alias Protein of unknown function (DUF630 and DUF632) 0.02 OrthoFinder output from all 47 species
AT5G25590 No alias Protein of unknown function (DUF630 and DUF632) 0.02 OrthoFinder output from all 47 species
Aev_g39411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48446 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g09870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037757 No alias not classified & original description: CDS=393-2315 0.03 OrthoFinder output from all 47 species
Azfi_s0080.g038449 No alias not classified & original description: CDS=121-2259 0.02 OrthoFinder output from all 47 species
Azfi_s0266.g060966 No alias not classified & original description: CDS=547-2748 0.06 OrthoFinder output from all 47 species
Azfi_s0273.g061331 No alias not classified & original description: CDS=277-2727 0.03 OrthoFinder output from all 47 species
Azfi_s0304.g063813 No alias not classified & original description: CDS=88-2331 0.02 OrthoFinder output from all 47 species
Azfi_s0385.g067523 No alias not classified & original description: CDS=1-2535 0.02 OrthoFinder output from all 47 species
Cba_g01214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G064300.1 Ceric.03G064300 not classified & original description: pacid=50572356... 0.02 OrthoFinder output from all 47 species
Ceric.17G022700.1 Ceric.17G022700 not classified & original description: pacid=50618371... 0.07 OrthoFinder output from all 47 species
Ceric.27G029900.1 Ceric.27G029900 not classified & original description: pacid=50605026... 0.08 OrthoFinder output from all 47 species
Dac_g02345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12389 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g01809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07102 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14883 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006889001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01018739001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01021596001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01023992001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01035712001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_15914 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_33037 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os05g16640.1 LOC_Os05g16640 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g11070.1 LOC_Os07g11070 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g13546 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g11019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426522g0020 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10432395g0010 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10434034g0020 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10437231g0010 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_13974g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g13560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05717 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17210 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05269 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16376 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g17348 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020758 No alias not classified & original description: CDS=148-2271 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021336 No alias not classified & original description: CDS=1-2424 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0181.g024846 No alias not classified & original description: CDS=1-2247 0.07 OrthoFinder output from all 47 species
Solyc01g111740.3.1 Solyc01g111740 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g07617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19034 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e002360_P001 Zm00001e002360 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e003599_P001 Zm00001e003599 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e021207_P003 Zm00001e021207 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e021917_P001 Zm00001e021917 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e027205_P001 Zm00001e027205 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e035963_P001 Zm00001e035963 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e035991_P001 Zm00001e035991 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e037852_P002 Zm00001e037852 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006867 DUF632 266 577
IPR006868 DUF630 1 58
No external refs found!