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  5. Sam_g16576

Sam_g16576


Description : not classified & original description: none


Gene families : OG0001082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001082_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16576

Target Alias Description ECC score Gene Family Method Actions
Aev_g45539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46547 MAP70-4, ATMAP70-4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08899.t1 MAP70-4,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13866 MAP70-4, ATMAP70-4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13134 MAP70-4, ATMAP70-4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011656001 MAP70-2, ATMAP70-2 Microtubule-associated protein 70-2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os12g44340.1 MAP70-1,... Microtubule-associated protein 70-1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Lfl_g05683 MAP70-4, ATMAP70-4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g008040.4.1 MAP70-1,... Microtubule-associated protein 70-1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g07608 MAP70-4, ATMAP70-4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41747 MAP70-4, ATMAP70-4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015752_P002 MAP70-2,... Microtubule-associated protein 70-2 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e017889_P001 MAP70-1,... Microtubule-associated protein 70-1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e030924_P003 MAP70-1,... Microtubule-associated protein 70-3 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e036017_P001 MAP70-1,... Microtubule-associated protein 70-3 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007010 cytoskeleton organization IEA Interproscan
MF GO:0008017 microtubule binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
CC GO:0030915 Smc5-Smc6 complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0106068 SUMO ligase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR009768 MAP70 58 603
No external refs found!