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  5. Sam_g16522

Sam_g16522


Description : not classified & original description: none


Gene families : OG0001315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g16522

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00166490 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.inner envelope TIC... 0.02 OrthoFinder output from all 47 species
AT2G34460 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G18890 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g056302 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g115349 TROL not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08850 No alias component *(Tic62) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Aop_g26310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34938 No alias component *(Tic62) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
Cba_g37473 No alias component *(Tic62) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Ceric.1Z144700.1 Ceric.1Z144700 component *(Tic62) of inner envelope TIC translocation... 0.06 OrthoFinder output from all 47 species
Dac_g33065 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10309 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g00919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16505 No alias component *(Tic62) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
GSVIVT01031907001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.03 OrthoFinder output from all 47 species
Gb_05064 No alias Protein TIC 62, chloroplastic OS=Pisum sativum... 0.03 OrthoFinder output from all 47 species
LOC_Os06g25439.1 LOC_Os06g25439 Uncharacterized protein At2g34460, chloroplastic... 0.05 OrthoFinder output from all 47 species
Len_g21786 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g45580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g45581 No alias component *(Tic62) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Lfl_g10375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_332596g0010 No alias Uncharacterized protein At2g34460, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g15467 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19097 No alias component *(Tic62) of inner envelope TIC translocation... 0.05 OrthoFinder output from all 47 species
Ore_g13449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32758 No alias component *(Tic62) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Pnu_g12655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g070760.4.1 Solyc02g070760 Uncharacterized protein At2g34460, chloroplastic... 0.02 OrthoFinder output from all 47 species
Solyc10g051110.1.1 Solyc10g051110 TIC62 protein involved in ferredoxin-NADP oxidoreductase... 0.06 OrthoFinder output from all 47 species
Spa_g06152 No alias component *(Tic62) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Spa_g21915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011593_P001 Zm00001e011593 TIC62 protein involved in ferredoxin-NADP oxidoreductase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 44 240
No external refs found!