Sam_g16477

Description : regulatory protein *(CYCP(CYCU) of cell cycle & original description: none

Gene families : OG0000303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g16477
Cluster	HCCA: Cluster_33

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00043p00103760	CYCP2;1,...	Cell cycle.regulation.cyclins.CYCP-type cyclin	0.02	OrthoFinder output from all 47 species
AT2G44740	CYCP4;1	cyclin p4;1	0.02	OrthoFinder output from all 47 species
AT3G05327	No alias	Cyclin family protein	0.02	OrthoFinder output from all 47 species
AT3G63120	CYCP1;1	cyclin p1;1	0.04	OrthoFinder output from all 47 species
Adi_g006736	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Adi_g019195	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Aev_g12842	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ala_g15122	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Als_g04798	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Aob_g04277	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Aob_g07900	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Aop_g00597	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Aop_g11744	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Aop_g14532	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ceric.07G089000.1	CYCP3;2, Ceric.07G089000	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Ceric.07G089100.1	CYCP3;2, Ceric.07G089100	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Dac_g02043	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.05	OrthoFinder output from all 47 species
Dac_g04053	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Dac_g21404	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Dcu_g07480	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ehy_g06469	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Ehy_g19486	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Gb_39399	CYCP4;1	cyclin (CYCP)	0.03	OrthoFinder output from all 47 species
LOC_Os02g03294.1	CYCP4;1, LOC_Os02g03294	cyclin (CYCP)	0.02	OrthoFinder output from all 47 species
LOC_Os04g46660.1	cycp3;1, LOC_Os04g46660	cyclin (CYCP)	0.03	OrthoFinder output from all 47 species
LOC_Os10g41430.1	CYCP4;1, LOC_Os10g41430	cyclin (CYCP)	0.02	OrthoFinder output from all 47 species
Len_g01797	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Len_g03235	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Lfl_g00807	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Msp_g01992	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Msp_g48178	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Ore_g22726	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.05	OrthoFinder output from all 47 species
Ore_g24433	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Ore_g28947	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.05	OrthoFinder output from all 47 species
Pir_g16206	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Ppi_g62553	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Solyc09g065200.4.1	CYCP1;1, Solyc09g065200	cyclin (CYCP)	0.03	OrthoFinder output from all 47 species
Spa_g03908	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Spa_g12296	CYCP3;2	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Spa_g12297	CYCP3;2	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Spa_g16879	CYCP3;2	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Spa_g17025	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Spa_g39740	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Spa_g47429	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Tin_g00571	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Tin_g05449	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Tin_g27209	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Tin_g28471	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Zm00001e007314_P001	cycp3;1, Zm00001e007314	cyclin (CYCP)	0.02	OrthoFinder output from all 47 species
Zm00001e041706_P001	CYCP2;1, Zm00001e041706	cyclin (CYCP)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEA	Interproscan
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	None	Extended
MF	GO:0019901	protein kinase binding	IEA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0042325	regulation of phosphorylation	None	Extended
BP	GO:0043549	regulation of kinase activity	None	Extended
BP	GO:0045859	regulation of protein kinase activity	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071900	regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016759	cellulose synthase activity	IEP	HCCA
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
MF	GO:0051087	chaperone binding	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013922	Cyclin_PHO80-like	78	186

External Links

No external refs found!

Sam_g16477

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation